| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,168,013 | (T)6→5 | coding (234/396 nt) | mqsA ← | antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,168,008 | 0 | T | . | 100.0% | 60.7 / NA | 15 | coding (239/396 nt) | mqsA | antitoxin of the MqsRA toxin‑antitoxin system/DNA‑binding transcriptional repressor MqsA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (9/6); total (9/6) | |||||||||||
ATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCG > NC_000913/3167929‑3168083 | aTTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCtt < 2:583947/81‑1 (MQ=255) ttCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAAcc > 2:583973/1‑81 (MQ=255) gAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATaa < 1:583948/81‑1 (MQ=255) aaCGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAAtt > 2:583974/1‑81 (MQ=255) cGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCa < 1:583949/81‑1 (MQ=255) tttACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTg < 1:583950/81‑1 (MQ=255) cccccAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGttt > 1:583975/1‑81 (MQ=255) aaaaTTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCAt < 1:583951/81‑1 (MQ=255) aaaTTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCAtt > 1:583982/1‑81 (MQ=255) aTTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCa > 1:583979/1‑81 (MQ=255) ttCGCTTGCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCAcc > 1:583972/1‑81 (MQ=255) gCCTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGTTGCCACTGTTTCGGCATTCACCGAAGc < 2:583952/79‑1 (MQ=255) ccTCTTTTTGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGccc > 1:583977/1‑80 (MQ=255) tttGGGTAAGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAAt < 1:583953/79‑1 (MQ=255) aaGAGAGAGC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACt > 1:583980/1‑81 (MQ=255) gagagC‑TTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTgcg > 1:583984/1‑81 (MQ=255) | ATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACTATAAATTCAGGTGCCACTGTTTCGGCATTCACCGAAGCCCGAAATGCCTTTACTTGCG > NC_000913/3167929‑3168083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |