| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 480,037 | (A)5→4 | intergenic (‑119/+53) | maa ← / ← hha | maltose O‑acetyltransferase/hemolysin expression modulating protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 480,033 | 0 | A | . | 100.0% | 47.0 / NA | 12 | intergenic (‑115/+57) | maa/hha | maltose O‑acetyltransferase/hemolysin expression modulating protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (6/6); total (6/6) | |||||||||||
AAGACGAAAAGTCAGTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCGAAAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCGAATTATTTATTAGCGAATAAATTTCCAT > NC_000913/479956‑480108 | aaGACGAAAAGTCAGTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCGaa > 2:105275/1‑79 (MQ=255) gACGAAAAGTCAGTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCGaaaagt < 2:105249/81‑3 (MQ=255) gAAAAGTCAGTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCGaaaagtat > 2:105268/1‑76 (MQ=255) aaaaGTCAGTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCGaaaagta > 1:105270/1‑75 (MQ=255) gTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCtt > 1:105267/1‑80 (MQ=255) gTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTta < 2:105250/81‑1 (MQ=255) aaGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTtaat > 1:105271/1‑80 (MQ=255) aaCGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAg < 1:105251/81‑1 (MQ=255) gTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCg > 1:105285/1‑81 (MQ=255) cATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCt < 1:105252/80‑1 (MQ=255) tgtgATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCg < 1:105253/77‑1 (MQ=255) gATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCg > 1:105274/1‑80 (MQ=255) gATAAAGATCACATAGGGTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCg > 2:105272/1‑80 (MQ=255) gggTATGTCTTCATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCGAATTATTTATTAGCg < 2:105254/80‑1 (MQ=255) cATGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCGAATTATTTATTAGCGAATAAATTTCCa > 1:105273/1‑81 (MQ=255) aTGGCG‑AAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCGAATTATTTATTAGCGAATAAATTTCCAt < 1:105255/81‑1 (MQ=255) | AAGACGAAAAGTCAGTGAAGAGAACGTTCCCATTACATCTGTGTGATAAAGATCACATAGGGTATGTCTTCATGGCGAAAAAGTATAAAATTCTTAATAAACAGCCGGTTATAGCTCCGAAAGCGAATTATTTATTAGCGAATAAATTTCCAT > NC_000913/479956‑480108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |