| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 916,505 | Δ1 bp | coding (33/1659 nt) | ybjD → | DUF2813 domain‑containing protein YbjD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 916,502 | 0 | T | . | 100.0% | 65.2 / NA | 16 | coding (30/1659 nt) | ybjD | DUF2813 domain‑containing protein YbjD |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (12/4); total (12/4) | |||||||||||
CCCGTTATACTGCCAGCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGGTTTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGGAGAACGCGTGGGGT > NC_000913/916423‑916574 | cccGTTATACTGCCAGCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGGtt > 2:189612/1‑81 (MQ=255)cccGTTATACTGCCAGCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGGtt > 1:189611/1‑81 (MQ=255) ttATACTGCCAGCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGGtttcgc < 2:189579/81‑4 (MQ=255) tGCCAGCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTAt > 1:189600/1‑80 (MQ=255) gCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCg > 1:189609/1‑81 (MQ=255) gTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGtt > 2:189599/1‑81 (MQ=255) aaaGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTg > 2:189603/1‑81 (MQ=255) ggATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCg < 2:189580/81‑1 (MQ=255) tatTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGaa < 1:189581/81‑1 (MQ=255) tGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGaacaaaa > 2:189615/1‑80 (MQ=255) aGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAaacaac > 1:189601/1‑81 (MQ=255) gATATGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTcc > 2:189620/1‑81 (MQ=255) atGATTCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGa > 1:189613/1‑81 (MQ=255) tCTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTggg > 2:189617/1‑81 (MQ=255) cTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTggg > 1:189608/1‑80 (MQ=255) cTTGAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTggg > 1:189607/1‑80 (MQ=255) gAGCGCGTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGgag > 2:189621/1‑80 (MQ=255) gcgTTGAAATTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGGAGAAcgc < 1:189582/81‑1 (MQ=255) aaTTGTGGG‑TTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGGAGAACGCGTGGGGt < 1:189583/81‑1 (MQ=255) | CCCGTTATACTGCCAGCGTAAAGGATAAGTCACATATTTCTGGAGGGGATATGATTCTTGAGCGCGTTGAAATTGTGGGTTTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGGAGAACGCGTGGGGT > NC_000913/916423‑916574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |