| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,394,406 | (A)6→7 | coding (1180/1614 nt) | mppA → | murein tripeptide ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,394,400 | 1 | . | A | 100.0% | 56.3 / NA | 17 | Q392K (CAA→AAA) | mppA | murein tripeptide ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (8/9); total (8/9) | |||||||||||
AAACTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATC‑AAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAATCAGGAAT > NC_000913/1394320‑1394475 | aaaCTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATc < 2:266163/81‑1 (MQ=255) aaCTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATc > 2:266177/1‑80 (MQ=255) cTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATC‑aaa < 1:266164/81‑1 (MQ=255) tgttgAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATC‑aaaa < 2:266165/79‑1 (MQ=255) tgAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATC‑aaaaaaatt > 2:266190/1‑78 (MQ=255) gcAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGAt < 1:266166/81‑1 (MQ=255) gcAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGAt > 1:266202/1‑81 (MQ=255) gcAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGAt > 1:266196/1‑81 (MQ=255) gcAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGAt < 1:266167/81‑1 (MQ=255) cTGGTTATGGTCCGCAAAAACCGCTGAAGCTAACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGATTGCt < 2:266168/81‑1 (MQ=255) aTGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCa > 1:266189/1‑81 (MQ=255) cGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGAt < 1:266169/80‑1 (MQ=255) aaaCCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGaa < 1:266170/81‑1 (MQ=255) cGCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTa < 1:266171/81‑1 (MQ=255) gCTTTTGTATAACACTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAg < 2:266172/81‑1 (MQ=255) tataACACTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTa > 1:266192/1‑80 (MQ=255) acTTCAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGc > 2:266201/1‑80 (MQ=255) cAGAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCaaaa < 2:266173/80‑1 (MQ=255) gAAAACCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAAt > 2:266206/1‑79 (MQ=255) aaaaCCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAATCAg > 2:266197/1‑81 (MQ=255) aaaCCATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAATCTTGGCGTAGATGTTAAATTGCAAAATCAg > 2:266194/1‑80 (MQ=255) ccATCAAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAATCAGGAAt < 2:266174/81‑1 (MQ=255) | AAACTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATC‑AAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAATCAGGAAT > NC_000913/1394320‑1394475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |