Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,107,972 | (T)8→10 | coding (358/1104 nt) | glf ← | UDP‑galactopyranose mutase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,107,964 | 1 | . | T | 100.0% | 31.6 / NA | 10 | K122K (AAG→AAA) | glf | UDP‑galactopyranose mutase |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (4/6); total (4/6) | |||||||||||
* | NC_000913 | 2,107,964 | 2 | . | T | 100.0% | 31.9 / NA | 10 | K122K (AAG→AAA) | glf | UDP‑galactopyranose mutase |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (4/6); total (4/6) |
ATCAATGCTTGGTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑TTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCTTTAACTCCCCACATTT > NC_000913/2107887‑2108025 || aTCAATGCTTGGTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑tt < 2:367857/80‑1 (MQ=255) aaTGCTTGGTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑tttttt < 1:367859/81‑1 (MQ=255) aaTGCTTGGTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑ttttt < 1:367858/80‑1 (MQ=255) tGGTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑ttttttttttct > 1:367880/1‑77 (MQ=255) ggTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑ttttttttttct > 2:367883/1‑76 (MQ=255) ctccCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAAt < 2:367861/80‑1 (MQ=255) aCTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATAtttt > 2:367886/1‑81 (MQ=255) aaTCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGcttct > 1:367885/1‑81 (MQ=255) tCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTg < 2:367862/81‑1 (MQ=255) ccTGCTCCTCCAAATTTTCAGGTACCTTGTCGCCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAgg < 2:367863/81‑1 (MQ=255) cctccAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCtt > 1:367882/1‑80 (MQ=255) ctccAAATTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCttt > 2:367888/1‑80 (MQ=255) aTTTTCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCTTTAACTccc < 1:367864/81‑1 (MQ=255) ttCAGGTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCTTTAACTCCCca < 2:367865/80‑1 (MQ=255) ggTACCTTGTCACCATACTTTTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCTTTAACTCCCCACAttt < 2:367866/81‑1 (MQ=255) || ATCAATGCTTGGTATAAGTCCTCCCCAACTAATGAAATCGCCTGCTCCTCCAAATTTTCAGGTACCTTGTCACCATAC‑‑TTTTTTTTCTGAGCATTAATGATATTTTGAGCTTCTTGAGGATCTTTAACTCCCCACATTT > NC_000913/2107887‑2108025 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |