| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,584,652 | (T)6→8 | intergenic (+93/‑107) | yrhD → / → yrhB | uncharacterized protein YrhD/putative heat shock chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,584,646 | 1 | . | T | 100.0% | 35.5 / NA | 11 | intergenic (+87/‑113) | yrhD/yrhB | uncharacterized protein YrhD/putative heat shock chaperone |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (6/5); total (6/5) | |||||||||||
| * | NC_000913 | 3,584,646 | 2 | . | T | 100.0% | 35.8 / NA | 11 | intergenic (+87/‑113) | yrhD/yrhB | uncharacterized protein YrhD/putative heat shock chaperone |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (6/5); total (6/5) | |||||||||||
AATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAAC‑‑‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTCTTTGCTCAATGTATCACAC > NC_000913/3584567‑3584715 || aaTCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAAC‑‑‑t < 2:682444/81‑1 (MQ=255) gACGTTCTGAAAAAGAAATCATAAAATATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAAC‑‑‑ttttttttca > 1:682461/1‑76 (MQ=255) aaaaaGAAATCATAAAATATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCAt > 1:682475/1‑81 (MQ=255) aGAAATCATAAAATATTAGCAGATACTTATTTCGTGACTGTATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTtaa > 1:682472/1‑81 (MQ=255) aaaaTATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCtt > 2:682459/1‑81 (MQ=255) aaaTATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCttt > 1:682477/1‑81 (MQ=255) aGCAGATACTTATTTCGTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACg > 2:682469/1‑78 (MQ=255) tttCGTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTc < 1:682445/80‑1 (MQ=255) tttCGTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTc < 2:682446/80‑1 (MQ=255) gTGACTATATCTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTCTTTGc < 1:682447/81‑1 (MQ=255) tatCTTATCCGATGAACTTTTTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTCTTTGCTCAAt < 2:682448/80‑1 (MQ=255) cTTATCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTCTTTGCTCAATGTAt > 2:682466/1‑80 (MQ=255) tCCGATGAACTT‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTCTTTGCTCAATGTATcacac < 1:682449/81‑1 (MQ=255) || AATCCCGTTCGACGTTCTGAAAAAGAAATCATAAAATATTAGCAGATACTTATTTCGTGACTATATCTTATCCGATGAAC‑‑‑TTTTTTCAAAACCAGCATTTAATAATATCTTTGACGAAGATGAACGCGTCTTTGCTCAATGTATCACAC > NC_000913/3584567‑3584715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |