| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 528,621 | (A)7→8 | pseudogene (673/711 nt) | ylbH → | putative RHS domain‑containing protein YlbH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 528,614 | 1 | . | A | 100.0% | 29.4 / NA | 10 | pseudogene (666/711 nt) | ylbH | putative RHS domain‑containing protein YlbH |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (5/5); total (5/5) | |||||||||||
TGTAAATGACCATGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCAT‑‑AAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGTAATCTATCAAAGATGATAATATTTATTTTT > NC_000913/528536‑528687 | tGTAAATGACCATGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCAT‑‑a > 1:115733/1‑80 (MQ=255) tGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATa > 1:115744/1‑80 (MQ=255) gggTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATa > 2:115732/1‑79 (MQ=255) gACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATAAAAAAAAACGATAAAGGc < 1:115718/80‑1 (MQ=255) gACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATAAAGGCtt > 1:115738/1‑81 (MQ=255) aTGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATAAAGGCTTTAc < 2:115719/81‑1 (MQ=255) aacaGATTGCTCAGATAGATGTCGTTATTATATTAATCCAGAGCATA‑AAAAAAACGATTAAGGCTTTACAAGATGCTGGCt < 1:115720/81‑1 (MQ=255) aTTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATAAAGGCTTTACAAGATGCTGGCTAtctc < 2:115721/81‑1 (MQ=255) cTCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGt < 1:115722/81‑1 (MQ=255) tCAGATAGATGTAGTGATTATATTAATCCAGAGCATA‑AAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGt > 2:115742/1‑80 (MQ=255) agagCATA‑AAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGTAATCTATCAAAGATGATAATATTTAttttc > 2:115731/1‑80 (MQ=255) | TGTAAATGACCATGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCAT‑‑AAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGTAATCTATCAAAGATGATAATATTTATTTTT > NC_000913/528536‑528687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |