Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 916,112 | (A)6→7 | intergenic (‑65/‑361) | aqpZ ← / → ybjD | water channel AqpZ/DUF2813 domain‑containing protein YbjD |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 916,106 | 1 | . | A | 100.0% | 35.9 / NA | 11 | intergenic (‑59/‑367) | aqpZ/ybjD | water channel AqpZ/DUF2813 domain‑containing protein YbjD |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (7/4); total (7/4) |
CTGCTAATTTTCTGAACATATCCACCACAATTAAAAATTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGT‑AAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAACGAAGGCGAGTCATTCACCAGATAAATA > NC_000913/916029‑916175 | ctgctAATTTTCTGAACATATCCACCACAATTAAAAATTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGT‑aaa < 1:189543/81‑1 (MQ=255) aaCATATCCACCACAATTAAAAATTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTgacgac < 2:189545/79‑1 (MQ=255) atCCACCACAATTAAAAATTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAaat > 1:189565/1‑80 (MQ=255) ccaccaCAATTAAAAATTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAaataat > 1:189560/1‑81 (MQ=255) aaaaaTTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTAtt > 2:189564/1‑81 (MQ=255) aTTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTa > 2:189559/1‑80 (MQ=255) ttGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGTGCGGCTATTTTaaa < 1:189546/81‑1 (MQ=255) aCCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAAc > 1:189566/1‑81 (MQ=255) gTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAACGAAGGCGAGTCATTCAc > 2:189571/1‑78 (MQ=255) gTTTTATAGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAACGAAGGCGAGTCATTCACCa < 1:189547/80‑1 (MQ=255) ataGGGTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAACGAAGGCGAGTCATTCACCAGataaa > 2:189568/1‑81 (MQ=255) gggTCGTCGTAAAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAACGAAGGCGAGTCATTCACCAGataaata < 2:189548/80‑1 (MQ=255) | CTGCTAATTTTCTGAACATATCCACCACAATTAAAAATTGACCCTGTGAAAAATATGGTCGTTTTATAGGGTCGTCGT‑AAAAAAGTGACGACGGAAATAATGCGCGGCTATTTTAAAAACGAAGGCGAGTCATTCACCAGATAAATA > NC_000913/916029‑916175 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |