| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 919,229 | A→G | intergenic (‑109/‑6) | ybjX ← / → macA | DUF535 domain‑containing protein YbjX/ABC‑type tripartite efflux pump membrane fusion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 919,229 | 0 | A | G | 100.0% | 50.1 / NA | 15 | intergenic (‑109/‑6) | ybjX/macA | DUF535 domain‑containing protein YbjX/ABC‑type tripartite efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/7); total (8/7) | |||||||||||
AACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACG > NC_000913/919157‑919306 | aaCGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTAt > 2:190091/1‑80 (MQ=255) gTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGaaa < 1:190064/81‑1 (MQ=255) gTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGaa > 1:190090/1‑80 (MQ=255) tAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGaaa > 1:190089/1‑80 (MQ=255) aGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGaa < 2:190065/80‑1 (MQ=255) gttgATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTg > 1:190087/1‑79 (MQ=255) gATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTgaaga < 2:190066/80‑1 (MQ=255) cGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGcgttac > 2:190119/1‑81 (MQ=255) gTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGcgttac < 2:190067/80‑1 (MQ=255) aCCCGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGt > 1:190088/1‑81 (MQ=255) ccGGATTGGCATATGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGa > 1:190093/1‑81 (MQ=255) tGGAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCgg < 2:190068/81‑1 (MQ=255) gAGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGa < 1:190069/80‑1 (MQ=255) aGTATTCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACt < 1:190070/81‑1 (MQ=255) ttCAGAGAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGAt > 1:190095/1‑80 (MQ=255) agagAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACg > 1:190097/1‑81 (MQ=255) agagAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACg < 1:190071/81‑1 (MQ=255) | AACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACG > NC_000913/919157‑919306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |