| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 987,285 | T→C | intergenic (‑303/+300) | ompF ← / ← asnS | outer membrane porin F/asparagine‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 987,285 | 0 | T | C | 100.0% | 39.3 / NA | 12 | intergenic (‑303/+300) | ompF/asnS | outer membrane porin F/asparagine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/7); total (5/7) | |||||||||||
AACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTTAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGACCTGGCACAAAATCTTCTTTCAGACATC > NC_000913/987210‑987358 | aaCACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTCAAAt < 1:202363/80‑1 (MQ=255) cacCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTCAAATTaa > 1:202378/1‑81 (MQ=255) tatTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTCAAATTAACTAAACg > 2:202389/1‑80 (MQ=255) tttCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTGTATTCAAATTAACTAAACGGaa < 1:202364/81‑1 (MQ=255) cATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTCAAATTAACTAAACGGAAAttt < 1:202365/81‑1 (MQ=255) agagACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTCAAATTAACTAAACGGAAATTTTGt > 2:202385/1‑81 (MQ=255) atTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTCAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACt > 1:202390/1‑81 (MQ=255) aaTTTTAATCTATTTATATGATTTCCTTATATTCAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGAcc < 2:202366/81‑1 (MQ=255) aTTTTAATCTATTTATATGATTTCCTTATATTCAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGACCt < 1:202367/81‑1 (MQ=255) tttCCTTATATTCAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGACCTGGCACAAAATCTTCttt > 1:202397/1‑78 (MQ=255) ccTTATATTCAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGACCTGGCACAAAATCTTCTTTCAGAc < 2:202368/80‑1 (MQ=255) atatTCAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGACCTGGCACAAAATCTTCTTTCAGACATc < 1:202369/79‑1 (MQ=255) | AACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATTTATATGATTTCCTTATATTTAAATTAACTAAACGGAAATTTTGTTTCTGATGGAAACTTTATCGACCTGGCACAAAATCTTCTTTCAGACATC > NC_000913/987210‑987358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |