Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,101,981 | G→A | N49N (AAC→AAT) | csgF ← | curli assembly component |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,101,981 | 0 | G | A | 100.0% | 23.5 / NA | 8 | N49N (AAC→AAT) | csgF | curli assembly component |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/4); total (4/4) |
CTGAGTAAAGTTATCTAACGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAGTTTTGGGCCTGAGCGCTATTTAATAAAAAAGCGCCATTATTTGGGTTACCACCAAAGTTTGGATTACGGAACTGGA > NC_000913/1101909‑1102057 | cTGAGTAAAGTTATCTAACGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAATTTTGGGc < 2:221803/81‑1 (MQ=255) aGTAAAGTTATCTAACGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAATTTTGGGcc < 1:221804/79‑1 (MQ=255) aaCGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAATTTTGGGCCTGAGCGCTATTtaa > 1:221828/1‑80 (MQ=255) aaCGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAATTTTGGGCCTGAGCGCTATTtaa > 2:221821/1‑80 (MQ=255) aCGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAATTTTGGGCCTGAGCGCTATTtaata < 1:221805/81‑1 (MQ=255) aCGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAATTTTGGGCCTGAGCGCTATTtaa < 1:221806/79‑1 (MQ=255) gTTATAGCTCGGATCTTTATAAGAATTTTGGGCCTGAGCGCTATTTAATAAAAAAGCGCCATTATTTGGGTTAccacca > 1:221826/1‑79 (MQ=255) cGGATCTTTATAAGAATTTTGGGCCTGAGCGCTATTTAATAAAAAAGCGCCATTATTTGGGTTACCACCAAAGTTTGGAt > 1:221824/1‑80 (MQ=255) agaaTTTTGGGCCTGAGCGCTATTTAATAAAAAAGCGCCATTATTTGGGTTACCACCAAAGTTTGGATTACGGAACTGGa > 1:221834/1‑80 (MQ=255) | CTGAGTAAAGTTATCTAACGCTGAGGGTGTTTCAATACCAAAGTCATCGTTATAGCTCGGATCTTTATAAGAGTTTTGGGCCTGAGCGCTATTTAATAAAAAAGCGCCATTATTTGGGTTACCACCAAAGTTTGGATTACGGAACTGGA > NC_000913/1101909‑1102057 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |