| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,197,362 | T→C | L57L (TTA→TTG) | ymfD ← | e14 prophage; putative SAM‑dependent methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,197,362 | 0 | T | C | 100.0% | 43.2 / NA | 13 | L57L (TTA→TTG) | ymfD | e14 prophage; putative SAM‑dependent methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/7); total (6/7) | |||||||||||
TTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTC > NC_000913/1197285‑1197439 | ttAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAAt > 1:237402/1‑81 (MQ=255) aaTTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAAtt > 2:237392/1‑80 (MQ=255) aatTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATc > 1:237396/1‑80 (MQ=255) atTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATCTa < 2:237381/81‑1 (MQ=255) ctctctTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATCTAAGtt < 1:237382/80‑1 (MQ=255) tttCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATCTAAGTTTTc < 1:237383/78‑1 (MQ=255) gAGTCTAGAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGc < 1:237384/80‑1 (MQ=255) gTCTAGAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTg > 1:237399/1‑81 (MQ=255) gAAAAGTAACTTCATCAAATTTACTGATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCa < 1:237385/80‑1 (MQ=255) aCTTCATCAAATTTACTGATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtctc < 2:237386/80‑1 (MQ=255) ttCATCAAATTTACTGATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAAt > 1:237403/1‑81 (MQ=255) atcaAATTTACTGATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCt < 2:237387/81‑1 (MQ=255) gATCAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTc > 1:237401/1‑81 (MQ=255) | TTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTC > NC_000913/1197285‑1197439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |