| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,199,190 | G→A | V166I (GTT→ATT) | lit → | e14 prophage; cell death peptidase Lit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,199,190 | 0 | G | A | 100.0% | 47.4 / NA | 14 | V166I (GTT→ATT) | lit | e14 prophage; cell death peptidase Lit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (7/7); total (7/7) | |||||||||||
GAAGACTCACAAGTTGCTAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTGTTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTCACATGCTACAAAATG > NC_000913/1199115‑1199266 | gAAGACTCACAAGTTGCTAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTa < 1:237530/81‑1 (MQ=255) cacaAGTTGCTAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATc > 1:237546/1‑81 (MQ=255) tAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCAc > 1:237549/1‑81 (MQ=255) aGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCAc > 2:237548/1‑80 (MQ=255) aGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCAc > 2:237550/1‑80 (MQ=255) atatTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCa > 2:237556/1‑81 (MQ=255) tgtgCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCa < 2:237531/79‑1 (MQ=255) ttGCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAgagg < 2:237532/81‑1 (MQ=255) gCTTGGATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAgagga < 2:237533/80‑1 (MQ=255) ggATTCTTCATCATGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGt < 1:237534/80‑1 (MQ=255) catGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTca > 2:237559/1‑81 (MQ=255) atGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTGCAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTcac < 1:237535/81‑1 (MQ=255) atGAAATAAGTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTca > 1:237561/1‑80 (MQ=255) gTCATGTTATTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTCACATGCTACaa < 1:237536/81‑1 (MQ=255) tgttatTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTCACATGCTACAAAATg > 2:237553/1‑81 (MQ=255) | GAAGACTCACAAGTTGCTAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTGTTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTCACATGCTACAAAATG > NC_000913/1199115‑1199266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |