| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,222,638 | C→T | intergenic (‑4/+6) | ymgD ← / ← ymgG | PF16456 family protein YmgD/PF13488 family protein YmgG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,222,638 | 0 | C | T | 100.0% | 53.6 / NA | 16 | intergenic (‑4/+6) | ymgD/ymgG | PF16456 family protein YmgD/PF13488 family protein YmgG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/9); total (7/9) | |||||||||||
TAATATTGTAGTCCTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATCATTCCTTATTTCATTTTACCCAGAATTGCACCACCCGTACCGCCAATCACGGCACCTTTAATCGCCCCTTC > NC_000913/1222562‑1222709 | tAATATTGTAGTCCTGAGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCattatt < 2:240357/80‑1 (MQ=255) atatTGTAGTCCTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCt > 1:240377/1‑81 (MQ=255) ttGTAGTCCTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTa < 2:240358/80‑1 (MQ=255) ttGTAGTCCTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTAt > 1:240383/1‑81 (MQ=255) tAGTCCTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTAttt < 1:240359/80‑1 (MQ=255) cTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCAtttt < 1:240360/81‑1 (MQ=255) cTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCAtttt < 2:240361/81‑1 (MQ=255) cTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCAttt > 1:240385/1‑80 (MQ=255) gcCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCATTTTAccc < 2:240362/81‑1 (MQ=255) cccAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCATTTTAcc > 1:240390/1‑79 (MQ=255) ggTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCATTTTACCCAGAAt < 1:240363/81‑1 (MQ=255) tGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCATTTTACCCAGAATTGcac > 1:240384/1‑80 (MQ=255) aaacaaacAGGCCCGCCAGTAAAGCAAATTTTTTCATCATTATTCCTTATTTCATTTTACCCAGAATTGCACCACCCGTAc > 2:240380/1‑81 (MQ=255) gTAAAGCAAATTTTTTCATCATTATTCCTTATTTCATTTTACCCAGAATTGCACCACCCGTACCGCCAATCACGGCACCtt < 1:240364/81‑1 (MQ=255) aGCAAATTTTTTCATCATTATTCCTTATTTCATTTTACCCAGAATTGCACCACCCGTACCGCCAATCACGGCACCTTTAAt < 2:240365/81‑1 (MQ=255) aGCAAATTTTTTCATCATTATTCCTTATTTCATTTTACCCAGAATTGCACCACCCGTACCGCCAATCACGGCACCTTTAAt > 2:240386/1‑81 (MQ=255) ttCATCATTATTCCTTATTTCATTTTACCCTGAATTGCACCACCCGTACCGCCAATCACGGCACCTTTAATCGCCCCTTc < 1:240366/80‑1 (MQ=255) | TAATATTGTAGTCCTGCGCCCAGGTCATTGGTGCGAAAACAAACAGGCCCGCCAGTAAAGCAAATTTTTTCATCATCATTCCTTATTTCATTTTACCCAGAATTGCACCACCCGTACCGCCAATCACGGCACCTTTAATCGCCCCTTC > NC_000913/1222562‑1222709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |