| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,292,886 | T→C | T13A (ACT→GCT) | hns ← | DNA‑binding transcriptional dual regulator H‑NS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,292,886 | 0 | T | C | 100.0% | 54.9 / NA | 16 | T13A (ACT→GCT) | hns | DNA‑binding transcriptional dual regulator H‑NS |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (4/12); total (4/12) | |||||||||||
TTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTT > NC_000913/1292810‑1292955 | ttAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACg > 1:251018/1‑80 (MQ=255) caacaacTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGAtgt < 1:250978/81‑1 (MQ=255) tttCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTa < 2:250979/80‑1 (MQ=255) ttCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCATGGATGTTGTTCAGAATTTTAAg > 1:251019/1‑81 (MQ=255) cATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTc < 1:250980/81‑1 (MQ=255) aTTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCg < 2:250981/81‑1 (MQ=255) tttCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGc < 1:250982/81‑1 (MQ=255) cttcCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTc < 2:250983/80‑1 (MQ=255) cAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTgt < 2:250984/81‑1 (MQ=255) cGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTgtagt < 1:250985/81‑1 (MQ=255) gTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTgtagta < 1:250986/81‑1 (MQ=255) ttCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAAt > 1:251017/1‑81 (MQ=255) aGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCa < 2:250987/81‑1 (MQ=255) aGTGTACATTCTCTTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCa < 2:250988/81‑1 (MQ=255) ctTGCCTGCGCACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTgg > 2:251021/1‑81 (MQ=255) cgcACGAAGAGCACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGttt < 1:250989/81‑1 (MQ=255) | TTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTT > NC_000913/1292810‑1292955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |