| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,437,191 | A→G | noncoding (71/109 nt) | micC → | small regulatory RNA MicC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,437,191 | 0 | A | G | 100.0% | 45.9 / NA | 14 | noncoding (71/109 nt) | micC | small regulatory RNA MicC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/8); total (6/8) | |||||||||||
CGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAAT > NC_000913/1437116‑1437264 | cgcgGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTaaa < 1:271913/80‑1 (MQ=255) tataTGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGAc > 1:271962/1‑78 (MQ=255) atatGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAg < 2:271914/80‑1 (MQ=255) cTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAAc < 2:271915/81‑1 (MQ=255) acaGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCg < 2:271916/80‑1 (MQ=255) gATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCt < 1:271917/81‑1 (MQ=255) ttattttCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCttttt > 1:271930/1‑81 (MQ=255) ttattttCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCttttt > 2:271933/1‑81 (MQ=255) cTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAg > 1:271929/1‑80 (MQ=255) gTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAAt > 2:271934/1‑81 (MQ=255) ttGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGa < 2:271918/78‑1 (MQ=255) aTTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGc < 1:271919/79‑1 (MQ=255) ccAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTaa < 2:271920/80‑1 (MQ=255) ccAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAAt > 1:271939/1‑81 (MQ=255) | CGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAAT > NC_000913/1437116‑1437264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |