| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,437,204 | C→A | noncoding (84/109 nt) | micC → | small regulatory RNA MicC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,437,204 | 0 | C | A | 100.0% | 37.3 / NA | 12 | noncoding (84/109 nt) | micC | small regulatory RNA MicC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (6/6); total (6/6) | |||||||||||
CTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAATCGGTGTTGCTTTTTTCC > NC_000913/1437130‑1437281 | cTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAAc < 2:271915/81‑1 (MQ=255) acaGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCg < 2:271916/80‑1 (MQ=255) gATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCt < 1:271917/81‑1 (MQ=255) ttattttCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCttttt > 1:271930/1‑81 (MQ=255) ttattttCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCttttt > 2:271933/1‑81 (MQ=255) cTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAg > 1:271929/1‑80 (MQ=255) gTTGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAAt > 2:271934/1‑81 (MQ=255) ttGGGCCATTGCATTGCCACTGATTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGa < 2:271918/78‑1 (MQ=255) aTTTTCCAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGc < 1:271919/79‑1 (MQ=255) ccAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTaa < 2:271920/80‑1 (MQ=255) ccAACATGTAAAAAGACAAGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAAt > 1:271939/1‑81 (MQ=255) aaGACCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAATCGGTGTTGCTTTTTTcc > 2:271942/1‑81 (MQ=255) | CTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATCCTTATCCAGAGCATTTAATCGGTGTTGCTTTTTTCC > NC_000913/1437130‑1437281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |