| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,512,246 | T→G | V198G (GTT→GGT) | ydcS → | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,512,246 | 0 | T | G | 100.0% | 54.6 / NA | 16 | V198G (GTT→GGT) | ydcS | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (11/5); total (11/5) | |||||||||||
ACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAA > NC_000913/1512174‑1512321 | aCGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCa > 2:282635/1‑81 (MQ=255) cGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCAc > 2:282626/1‑81 (MQ=255) agCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCg > 2:282630/1‑81 (MQ=255) gCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCg > 1:282632/1‑80 (MQ=255) ggCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTggg > 1:282629/1‑80 (MQ=255) gCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCa > 1:282636/1‑81 (MQ=255) gcgTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCa < 1:282611/81‑1 (MQ=255) cAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGa < 1:282612/80‑1 (MQ=255) atgGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAAc > 1:282647/1‑81 (MQ=255) atgGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAAc > 2:282634/1‑81 (MQ=255) ctatATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCgaag > 2:282640/1‑80 (MQ=255) atTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAg > 1:282665/1‑81 (MQ=255) cGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGt < 1:282614/79‑1 (MQ=255) cGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTg < 2:282613/80‑1 (MQ=255) gttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGa > 2:282644/1‑80 (MQ=255) ttCGGTAAGGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGaa < 1:282615/80‑1 (MQ=255) | ACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAA > NC_000913/1512174‑1512321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |