| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,516,272 | T→C | I232T (ATC→ACC) | patD → | gamma‑aminobutyraldehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,516,272 | 0 | T | C | 100.0% | 57.0 / NA | 17 | I232T (ATC→ACC) | patD | gamma‑aminobutyraldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/9); total (8/9) | |||||||||||
GGTGGGTGATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACATCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGTTTTTGA > NC_000913/1516195‑1516347 | ggtgggtgATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCAcaccat > 1:283248/1‑81 (MQ=255) tgggtgATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCAcaccat > 1:283225/1‑79 (MQ=255) gtgATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGcc < 2:283226/81‑1 (MQ=255) gCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACcgc > 1:283253/1‑81 (MQ=255) aCCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGcgtc < 1:283227/80‑1 (MQ=255) cGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCgtcgtc > 1:283259/1‑81 (MQ=255) ggTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCgtcgtc > 2:283244/1‑80 (MQ=255) gTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCa > 2:283255/1‑81 (MQ=255) ccAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGc > 1:283256/1‑81 (MQ=255) ccAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGc < 2:283228/81‑1 (MQ=255) gTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACt > 2:283261/1‑81 (MQ=255) cGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCat < 1:283229/81‑1 (MQ=255) tgtCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAAc < 1:283230/81‑1 (MQ=255) tCGCTGACGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACtt < 1:283231/81‑1 (MQ=255) cGGGCTCTATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCa < 1:283232/81‑1 (MQ=255) ctctATCGCCACCGGCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAgc < 2:283233/81‑1 (MQ=255) ggCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGtt > 2:283258/1‑81 (MQ=255) ggCGAGCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGtt > 2:283268/1‑81 (MQ=255) gCACACCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGTTTTtga < 1:283234/81‑1 (MQ=255) | GGTGGGTGATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACATCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGTTTTTGA > NC_000913/1516195‑1516347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |