| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,567,328 | G→A | intergenic (‑109/+176) | yddY ← / ← yddW | protein YddY/putative lipoprotein YddW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,567,328 | 0 | G | A | 100.0% | 43.5 / NA | 13 | intergenic (‑109/+176) | yddY/yddW | protein YddY/putative lipoprotein YddW |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (8/5); total (8/5) | |||||||||||
AGAAATAAGCGATTTAGGACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGGTGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTATGGCTGTTTAACTAAGTGTG > NC_000913/1567250‑1567402 | aGAAATAAGCGATTTAGGACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATg < 1:290176/81‑1 (MQ=255) aaTAAGCGATTTAGGACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGa > 1:290191/1‑79 (MQ=255) aTTTAGGACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGACAGCGAatat > 1:290188/1‑81 (MQ=255) ttAGGACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGACAGCGAATATCg > 2:290196/1‑81 (MQ=255) ggACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGACAGCGAATATCGTAt > 1:290193/1‑81 (MQ=255) aGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGACAGCGAATATCGTATGGtt > 1:290189/1‑81 (MQ=255) aCGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGACAGCGAATATCGTATGGTTTttcatattca > 2:290194/1‑81 (MQ=255) cGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGATGACAGCGAATATCGTATGGTTTttcatat < 1:290177/77‑1 (MQ=255) gTATAGCCCATCGTAATTATTTTTCGATGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTa < 2:290178/81‑1 (MQ=255) gCCCATCGTAATTATTTTTCGATGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTATGGCt < 1:290179/81‑1 (MQ=255) aTCGTAATTATTTTTCGATGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTATGGCTGttt < 1:290180/81‑1 (MQ=255) aaTTATTTTTCGATGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTATGGCTGTTTAACt > 2:290195/1‑80 (MQ=255) ttttCGATGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTATGGCTGTTTAACTAAGtgtg > 1:290199/1‑81 (MQ=255) | AGAAATAAGCGATTTAGGACAGTTTCAATCTACGCTACTGTTCTTCAGAAGAGTATAGCCCATCGTAATTATTTTTCGGTGACAGCGAATATCGTATGGTTTTTCATATTCATACATTTTTATTAGGGATTTATGGCTGTTTAACTAAGTGTG > NC_000913/1567250‑1567402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |