| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,592,490 | T→C | intergenic (‑48/+175) | hipB ← / ← yneO | antitoxin/DNA‑binding transcriptional repressor HipB/AIDA‑I family autotransporter YneO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,592,490 | 0 | T | C | 100.0% | 61.2 / NA | 18 | intergenic (‑48/+175) | hipB/yneO | antitoxin/DNA‑binding transcriptional repressor HipB/AIDA‑I family autotransporter YneO |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/7); total (11/7) | |||||||||||
TTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCC > NC_000913/1592412‑1592563 | ttGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGtctt < 1:293048/81‑1 (MQ=255) ggCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTAt < 2:293049/80‑1 (MQ=255) tataGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGTAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCtt > 2:293061/1‑81 (MQ=255) gAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGAt > 1:293069/1‑79 (MQ=255) gCTCATCATGTCATACATCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTc > 1:293059/1‑80 (MQ=255) aTACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAaca < 1:293050/80‑1 (MQ=255) gTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCt > 2:293064/1‑81 (MQ=255) ccACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTa > 2:293071/1‑81 (MQ=255) aaGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGctc > 2:293068/1‑81 (MQ=255) aGTTTATCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGctct < 1:293051/81‑1 (MQ=255) aTCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACgg < 1:293053/80‑1 (MQ=255) aTCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACgg < 1:293052/80‑1 (MQ=255) tCCGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACggg < 2:293054/80‑1 (MQ=255) ccGCTTAAGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGa > 2:293070/1‑80 (MQ=255) aaGGGGATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGc > 2:293073/1‑81 (MQ=255) gggATATTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGc > 2:293075/1‑81 (MQ=255) atatTATAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGat < 1:293055/81‑1 (MQ=255) tattatAAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGata > 1:293098/1‑81 (MQ=255) tataAGTCTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATcc > 2:293062/1‑81 (MQ=255) | TTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCC > NC_000913/1592412‑1592563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |