Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,705,851	A→G	M29V (ATG→GTG)	rsxA →	SoxR [2Fe‑2S] reducing system protein RsxA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,705,851	0	A	G	100.0%	84.8 / NA	24	M29V (ATG→GTG)	rsxA	SoxR [2Fe‑2S] reducing system protein RsxA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (13/11);  total (13/11)

ACTACCTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTATGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTTGTGATGACGCTGGCGT  >  NC_000913/1705774‑1705923                                                                              |                                                                         actACCTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTgg                                                                       >  1:307534/1‑81 (MQ=255)     ccTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTggggg                                                                    <  1:307510/80‑1 (MQ=255)      cTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGtt                                                                  <  2:307511/81‑1 (MQ=255)        gTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTc                                                                >  1:307537/1‑81 (MQ=255)         ttACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTc                                                                <  1:307512/80‑1 (MQ=255)           aCTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCa                                                              >  2:307536/1‑80 (MQ=255)                ttGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAAc                                                        >  1:307574/1‑81 (MQ=255)                 tGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACt                                                       >  1:307540/1‑81 (MQ=255)                  gtaggAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACt                                                       <  2:307513/77‑1 (MQ=255)                     ggAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGa                                                    >  1:307547/1‑80 (MQ=255)                             aCTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGAt                                           >  2:307548/1‑81 (MQ=255)                              cTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGAt                                           <  2:307514/80‑1 (MQ=255)                              cTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATg                                          >  1:307539/1‑81 (MQ=255)                                    aaTAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATg                                    >  2:307551/1‑81 (MQ=255)                                      tAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATggg                                  <  2:307515/81‑1 (MQ=255)                                      tAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATggg                                  <  1:307516/81‑1 (MQ=255)                                              tACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGca                           <  1:307517/80‑1 (MQ=255)                                              tACTGGTCAAGTTTCTCGGTCTATGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGcaa                          <  1:307518/81‑1 (MQ=255)                                                  ggTCAAGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCaacaac                      >  1:307544/1‑81 (MQ=255)                                                      aaGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGttt                  >  1:307549/1‑81 (MQ=255)                                                      aaGTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGttt                  <  2:307519/81‑1 (MQ=255)                                                        gTTTCTCGGTCTCTGTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTtgt                >  2:307555/1‑81 (MQ=255)                                                                      gTCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTTGTGATGACGCTGGCGt  >  2:307543/1‑81 (MQ=255)                                                                       tCCGTTTGTGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTTGTGATGACGCTGGc    <  2:307520/78‑1 (MQ=255)                                                                              |                                                                         ACTACCTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTATGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTTGTGATGACGCTGGCGT  >  NC_000913/1705774‑1705923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑