Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,706,464	A→T	K39N (AAA→AAT)	rsxB →	SoxR [2Fe‑2S] reducing system protein RsxB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,706,464	0	A	T	100.0%	86.1 / NA	25	K39N (AAA→AAT)	rsxB	SoxR [2Fe‑2S] reducing system protein RsxB
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (11/14);  total (11/14)

GGCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCGGAAGC  >  NC_000913/1706390‑1706535                                                                           |                                                                        ggCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTg                                                                     <  2:307613/79‑1 (MQ=255) ggCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGAc                                                                   >  2:307632/1‑81 (MQ=255)  gCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACg                                                                  <  2:307614/81‑1 (MQ=255)         gTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCtt                                                           <  1:307615/81‑1 (MQ=255)             ggCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTAcc                                                        <  2:307616/80‑1 (MQ=255)               cgcCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCg                                                       >  2:307643/1‑79 (MQ=255)                gcCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCag                                                    <  2:307617/81‑1 (MQ=255)                  cATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCagag                                                  <  2:307618/81‑1 (MQ=255)                     tCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGc                                                 >  1:307648/1‑79 (MQ=255)                        gggTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAgtg                                            >  1:307644/1‑81 (MQ=255)                             aTGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGt                                        >  1:307649/1‑80 (MQ=255)                                     cgccgTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGt                               <  1:307619/81‑1 (MQ=255)                                        cgTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTAt                            >  1:307645/1‑81 (MQ=255)                                          ttttGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATcc                          <  2:307620/81‑1 (MQ=255)                                            ttGCGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCg                        >  1:307647/1‑81 (MQ=255)                                               cGGTGGAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGc                      <  1:307621/80‑1 (MQ=255)                                                    gAAGACGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGc                <  2:307622/81‑1 (MQ=255)                                                         cGATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTa           >  1:307655/1‑81 (MQ=255)                                                          gATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTAc          >  1:307652/1‑81 (MQ=255)                                                          gATCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTAc          <  2:307623/81‑1 (MQ=255)                                                           aTCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGCCAGTGCGGTTATCCCGGCTGTCGCCCCTAcg         >  2:307650/1‑81 (MQ=255)                                                            tCCGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTAcgc        >  2:307657/1‑81 (MQ=255)                                                              cGGTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCgg      <  2:307624/81‑1 (MQ=255)                                                               ggTCGTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCGGa     <  1:307625/81‑1 (MQ=255)                                                                   gTTGAGAATATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCGGAAGc  <  2:307626/80‑1 (MQ=255)                                                                           |                                                                        GGCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCGGAAGC  >  NC_000913/1706390‑1706535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑