| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,742,230 | C→A | T273N (ACC→AAC) | cfa → | cyclopropane fatty acyl phospholipid synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,742,230 | 0 | C | A | 100.0% | 53.8 / NA | 17 | T273N (ACC→AAC) | cfa | cyclopropane fatty acyl phospholipid synthase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (6/11); total (6/11) | |||||||||||
ATACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAACCGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCCTCTGTACGCCAGATTG > NC_000913/1742152‑1742304 | aTACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACg < 1:312619/81‑1 (MQ=255) ggtggtGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGa < 2:312620/81‑1 (MQ=255) gtggATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATcc < 2:312621/80‑1 (MQ=255) gATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTgg < 2:312622/81‑1 (MQ=255) gTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGAtt < 2:312623/80‑1 (MQ=255) gTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATta < 2:312624/81‑1 (MQ=255) tAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATtaa < 1:312625/81‑1 (MQ=255) tAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATtaa > 2:312640/1‑81 (MQ=255) aTTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATtaata < 1:312626/81‑1 (MQ=255) ttGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTaataaa > 1:312645/1‑81 (MQ=255) gAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTaataaat < 2:312627/80‑1 (MQ=255) cGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTAATAAATATAttt < 1:312628/81‑1 (MQ=255) ggAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTAATAAATATAtttt > 2:312644/1‑81 (MQ=255) cTGCTCCATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTtgc > 1:312647/1‑81 (MQ=255) ccATACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTtgcctgcc > 1:312642/1‑81 (MQ=255) tACTATCGGTTCGAAAAAAAACGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCctc < 1:312629/81‑1 (MQ=255) aaaaaaACGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCCTCTGTACGCCAGATTg > 1:312648/1‑81 (MQ=255) | ATACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAACCGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCCTCTGTACGCCAGATTG > NC_000913/1742152‑1742304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |