| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,820,744 | C→T | L157L (CTG→CTA) | chbC ← | N,N'‑diacetylchitobiose‑specific PTS enzyme IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,820,744 | 0 | C | T | 100.0% | 64.5 / NA | 19 | L157L (CTG→CTA) | chbC | N,N'‑diacetylchitobiose‑specific PTS enzyme IIC component |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/7); total (12/7) | |||||||||||
AAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAGGCCTCACCGACAC > NC_000913/1820671‑1820820 | aaGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCaa > 1:323408/1‑81 (MQ=255)aaGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCa < 2:323382/80‑1 (MQ=255) gCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCaat > 1:323405/1‑80 (MQ=255) aGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCaataa > 1:323407/1‑80 (MQ=255) gTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCaataataa > 2:323398/1‑81 (MQ=255) gCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATccc > 2:323392/1‑81 (MQ=255) cGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCg > 1:323410/1‑77 (MQ=255) aaTGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCg < 1:323383/80‑1 (MQ=255) aTGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGcc > 1:323411/1‑81 (MQ=255) aTGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGc < 1:323384/80‑1 (MQ=255) aTTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTaa < 2:323385/81‑1 (MQ=255) cggcggACAATAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAg > 2:323401/1‑81 (MQ=255) aTAAAGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCAcc > 1:323406/1‑80 (MQ=255) aaaGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAAc > 2:323409/1‑81 (MQ=255) aaGGTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAAcc < 1:323386/81‑1 (MQ=255) gTAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCa < 1:323387/81‑1 (MQ=255) tAAACATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCAt < 2:323388/81‑1 (MQ=255) aaaCATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCa > 2:323417/1‑79 (MQ=255) aCATTTCTGCCACCACTAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAgg > 2:323414/1‑81 (MQ=255) ccactaGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAGGCCTCACCGacac < 2:323389/81‑1 (MQ=255) | AAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAGGCCTCACCGACAC > NC_000913/1820671‑1820820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |