Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,259,134 | T→A | N55Y (AAC→TAC) | psuK ← | putative pseudouridine kinase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,259,134 | 0 | T | A | 100.0% | 38.2 / NA | 12 | N55Y (AAC→TAC) | psuK | putative pseudouridine kinase |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (7/5); total (7/5) |
CCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTT > NC_000913/2259058‑2259207 | ccAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAAccc < 2:394620/81‑1 (MQ=255) gattgattGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAg > 2:394637/1‑80 (MQ=255) ttgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGcc < 2:394621/81‑1 (MQ=255) ttAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTtgtg < 1:394622/81‑1 (MQ=255) aaaaaTCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTc > 2:394644/1‑81 (MQ=255) cTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGc < 1:394623/81‑1 (MQ=255) aCGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAat > 2:394648/1‑81 (MQ=255) aCGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAat > 2:394649/1‑81 (MQ=255) aGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAAttttatttta > 2:394641/1‑81 (MQ=255) aGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAAttttatttta > 2:394642/1‑81 (MQ=255) tAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTAcc < 2:394624/81‑1 (MQ=255) gCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGAttt > 2:394639/1‑81 (MQ=255) | CCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTT > NC_000913/2259058‑2259207 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |