| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,424,682 | A→T | D184E (GAT→GAA) | hisM ← | lysine/arginine/ornithine ABC transporter/histidine ABC transporter, membrane subunit HisM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,424,682 | 0 | A | T | 100.0% | 63.6 / NA | 19 | D184E (GAT→GAA) | hisM | lysine/arginine/ornithine ABC transporter/histidine ABC transporter, membrane subunit HisM |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (11/8); total (11/8) | |||||||||||
ATAGAGCACCGCGGCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGATCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCAGGATCACTTCGTTGCTGTATGCCGGTAACG > NC_000913/2424604‑2424758 | aTAGAGCACCGCGGCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTc < 2:426494/81‑1 (MQ=255)aTAGAGCACCGCGGCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTc < 2:426495/81‑1 (MQ=255) gCACCGCGGCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCa > 1:426522/1‑81 (MQ=255) aCCGCGGCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCAcc < 2:426496/81‑1 (MQ=255) cgcgGCAATGCCGAAGGCGGCAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGt > 1:426527/1‑81 (MQ=255) ggCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTgg > 2:426526/1‑80 (MQ=255) gCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTaaa > 2:426525/1‑81 (MQ=255) gCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAAc > 2:426529/1‑81 (MQ=255) gTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCa < 1:426497/81‑1 (MQ=255) aaaaGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAg > 2:426532/1‑80 (MQ=255) tGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTg > 1:426524/1‑80 (MQ=255) tACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTgcagc < 1:426498/81‑1 (MQ=255) tACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTgcag > 2:426537/1‑80 (MQ=255) gTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATc < 2:426499/81‑1 (MQ=255) tAATATCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCTGGATCACtt > 1:426534/1‑81 (MQ=255) tCGCGGGCTATTTTCAGCAGTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCAGGATCACTTCGtt < 1:426500/80‑1 (MQ=255) cagcagTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCAGGATCACTTCGTTGCTGTATGCCGGTa < 2:426501/80‑1 (MQ=255) gcagTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCAGGATCACTTCGTTGCTGTATGCCGGTAACg > 2:426541/1‑81 (MQ=255) cagTTCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCAGGATCACTTCGTTGCTGTATGCCGGTAACg > 1:426540/1‑80 (MQ=255) | ATAGAGCACCGCGGCAATGCCGAAGGCGGTAAAAGGTTGATACGTGGCGGCGTTAATATCGCGGGCTATTTTCAGCAGATCCGGCACCGTGGCAGTAAATGCCAACGCAGTAGAGTGCAGCATCAGGATCACTTCGTTGCTGTATGCCGGTAACG > NC_000913/2424604‑2424758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |