| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,522,608 | C→T | intergenic (‑131/+121) | xapR ← / ← xapB | DNA‑binding transcriptional activator XapR/xanthosine:H(+) symporter XapB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,522,608 | 0 | C | T | 100.0% | 65.3 / NA | 19 | intergenic (‑131/+121) | xapR/xapB | DNA‑binding transcriptional activator XapR/xanthosine:H(+) symporter XapB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (10/9); total (10/9) | |||||||||||
TTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCTTTCACTAAT > NC_000913/2522533‑2522680 | tttCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAgc < 1:444134/80‑1 (MQ=255) ttCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAgcg > 2:444152/1‑80 (MQ=255) ccaccaGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGa > 2:444155/1‑81 (MQ=255) atCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAAc > 2:444159/1‑80 (MQ=255) tCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACa < 2:444135/80‑1 (MQ=255) ccGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACa > 2:444160/1‑79 (MQ=255) catacataAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCAc > 1:444158/1‑81 (MQ=255) aaCACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCa < 1:444136/81‑1 (MQ=255) aTGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAAcc > 2:444150/1‑80 (MQ=255) taCCCGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGgaa < 1:444137/80‑1 (MQ=255) cccGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGgaaga > 2:444161/1‑80 (MQ=255) ccGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGgaagaa > 2:444156/1‑80 (MQ=255) cGGTAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGaaaa < 1:444138/81‑1 (MQ=255) tAATACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGaaaataa < 2:444139/81‑1 (MQ=255) tACATTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGaaaataaaat < 2:444140/81‑1 (MQ=255) aTTTGGTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATc > 2:444164/1‑81 (MQ=255) ggTACAGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCttt < 2:444141/80‑1 (MQ=255) aGGAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCTTTCACTaa > 2:444167/1‑81 (MQ=255) ggAATAGGTAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCTTTCACTAAt < 2:444142/81‑1 (MQ=255) | TTTCACCACCAGATATCCGACATACATAAACACAATGGATAATATACCCGGTAATACATTTGGTACAGGAATAGGCAAGCGCACGATTGTAAACAAAGCACCAATACCAAAACCAACGCCGGAAGAAAATAAAATATCTTTCACTAAT > NC_000913/2522533‑2522680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |