| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 311,801 | G→A | intergenic (‑465/‑311) | ecpR ← / → ykgL | DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 311,801 | 0 | G | A | 100.0% | 43.0 / NA | 13 | intergenic (‑465/‑311) | ecpR/ykgL | DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/4); total (9/4) | |||||||||||
GATAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATGCCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGT > NC_000913/311725‑311874 | gATAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCg > 2:70236/1‑80 (MQ=255) aTAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGca > 2:70234/1‑81 (MQ=255) aaaaCTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGt > 1:159928/1‑81 (MQ=255) atgatgAGTTGTCATTGAAGATGATTTGCCAATCAGTAAGATAATTTAATGGATTAACATACCGCACAAAATGGTTACAgg > 2:70248/1‑81 (MQ=255) gatgaGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGgtg > 2:70243/1‑81 (MQ=255) gaGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGtt > 2:70232/1‑80 (MQ=255) tCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTcc < 1:70219/80‑1 (MQ=255) ttGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATa < 2:70220/81‑1 (MQ=255) atgatTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAAt > 1:70239/1‑81 (MQ=255) tgatTTGCCAATCAGTAAGATATTTTAATGGGTTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATg < 2:70221/81‑1 (MQ=255) tGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGaaaa > 2:70247/1‑81 (MQ=255) gTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACggg < 2:70222/81‑1 (MQ=255) ttAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGt > 1:70260/1‑81 (MQ=255) | GATAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATGCCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGT > NC_000913/311725‑311874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |