| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,773,609 | A→C | T98P (ACA→CCA) | yfjW → | CP4‑57 prophage; uncharacterized protein YfjW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,773,609 | 0 | A | C | 100.0% | 58.5 / NA | 17 | T98P (ACA→CCA) | yfjW | CP4‑57 prophage; uncharacterized protein YfjW |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (5/12); total (5/12) | |||||||||||
ATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAATATAGC > NC_000913/2773536‑2773682 | aTGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCattatt < 1:496861/81‑1 (MQ=255) tGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCAttatta < 2:496862/81‑1 (MQ=255) gTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCATTATTAGc < 1:496863/81‑1 (MQ=255) ccTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCATTATTAGCTa < 2:496864/80‑1 (MQ=255) cTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCATTATTAGCTAtt < 1:496865/81‑1 (MQ=255) gCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCATTATTAGCTATTACATGGATTGTACt < 2:496866/80‑1 (MQ=255) cATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGAtg > 1:496888/1‑81 (MQ=255) ttATACAGCATAGAATTAAAGCCTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTaa > 1:496891/1‑81 (MQ=255) aTAGAATTAAAGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTCATACACGCCt < 2:496867/81‑1 (MQ=255) tAGAATTAAAGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCt > 1:496887/1‑80 (MQ=255) gAATTAAAGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAg < 2:496868/81‑1 (MQ=255) gAATTAAAGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAg < 2:496869/81‑1 (MQ=255) aaaGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACaa > 1:735179/1‑80 (MQ=255) aaaGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACaa > 2:496885/1‑80 (MQ=255) aaGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAat < 1:496870/80‑1 (MQ=255) aGCTTATTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAatat < 2:496871/81‑1 (MQ=255) aTTTACCATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAATATAGc < 2:496872/79‑1 (MQ=255) | ATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAATATAGC > NC_000913/2773536‑2773682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |