| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,119,306 | T→A | intergenic (‑194/+291) | yghJ ← / ← glcA | putative lipoprotein YghJ/glycolate/lactate:H(+) symporter GlcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,119,306 | 0 | T | A | 100.0% | 55.3 / NA | 16 | intergenic (‑194/+291) | yghJ/glcA | putative lipoprotein YghJ/glycolate/lactate:H(+) symporter GlcA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (11/5); total (11/5) | |||||||||||
GAAATTTATAAGAATAACCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAATTAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGTTTTAACGATTAAGATTGCAAAAGCAACAGATAG > NC_000913/3119236‑3119381 | gAAATTTATAAGAATAACCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACAtt > 1:572204/1‑81 (MQ=255) taAGAATAACCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAAc < 2:572197/80‑1 (MQ=255) gAATAACCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTaa > 1:572220/1‑81 (MQ=255) aaTAACCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAAc > 1:572213/1‑81 (MQ=255) aaCCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACta > 1:572223/1‑80 (MQ=255) ccccTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACtata > 1:572214/1‑80 (MQ=255) ccccTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACtata > 1:572216/1‑80 (MQ=255) gATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACTATATAAATttgtt < 1:572198/81‑1 (MQ=255) gATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACTATATAAATttgtt > 1:572211/1‑81 (MQ=255) gATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACTATATAAATttgtt > 1:572212/1‑81 (MQ=255) tCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACTATATAAATTTGTTgg > 1:572219/1‑79 (MQ=255) gCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGtttt < 2:572200/78‑1 (MQ=255) gCTATTTTTACGAAATTTCAACAAACAAAAAAATAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGTTTTa < 1:572199/79‑1 (MQ=255) aacaaaAAAATAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGTTTTAACGATTAAGATTGCAAAAGCaa > 2:572208/1‑78 (MQ=255) aaaaaaATAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGTTTTAACGATTAAGATTGCAAAAGCAACAGATa < 2:572201/81‑1 (MQ=255) aaaaATAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGTTTTAACGATTAAGATTGCAAAAGCAACAGATAg > 2:572222/1‑80 (MQ=255) | GAAATTTATAAGAATAACCCCTATACGATGTCTATCTGGCTATTTTTACGAAATTTCAACAAACAAAAAATTAACAACATTTCACAACGTAACTATATAAATTTGTTGGTAGTTTTAACGATTAAGATTGCAAAAGCAACAGATAG > NC_000913/3119236‑3119381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |