| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,185,497 | T→C | G28G (GGT→GGC) | ygiL → | putative fimbrial protein YgiL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,185,497 | 0 | T | C | 100.0% | 40.2 / NA | 13 | G28G (GGT→GGC) | ygiL | putative fimbrial protein YgiL |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/2); total (11/2) | |||||||||||
TAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGT > NC_000913/3185425‑3185568 | tAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATCGTTa > 2:587840/1‑80 (MQ=255) aaaaGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAAt > 2:587835/1‑81 (MQ=255) tcttGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTg > 1:587842/1‑80 (MQ=255) gTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCt > 2:587834/1‑81 (MQ=255) gTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCt > 2:587843/1‑81 (MQ=255) aGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTc > 1:587837/1‑80 (MQ=255) aaTGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATg > 2:587838/1‑81 (MQ=255) ttCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTa > 2:587841/1‑81 (MQ=255) tttCCAATAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTAtt > 1:587846/1‑80 (MQ=255) aTAACGTGTTTGCTGATGAAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAg < 2:587815/81‑1 (MQ=255) gatgaAGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGAttt > 1:587827/1‑80 (MQ=255) aGGTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGt < 2:587816/81‑1 (MQ=255) ggTCACGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGt > 1:587849/1‑80 (MQ=255) | TAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGT > NC_000913/3185425‑3185568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |