Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,505,023 | T→C | G322G (GGT→GGC) | yjhB → | putative sialic acid transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,505,023 | 0 | T | C | 100.0% | 46.8 / NA | 14 | G322G (GGT→GGC) | yjhB | putative sialic acid transporter |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (4/10); total (4/10) |
CTCTTTTTTTTATTTCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGTATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCGGTCTTATT > NC_000913/4504947‑4505098 | ctctTTTTTTTATTTCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTg < 1:910577/81‑1 (MQ=255) tttATTTCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGggtt < 2:910578/80‑1 (MQ=255) tttCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGggttggtt < 1:910579/80‑1 (MQ=255) tCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTcc < 1:910581/80‑1 (MQ=255) tCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTcc < 2:910580/80‑1 (MQ=255) tgAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTCCaaaa < 1:910582/80‑1 (MQ=255) aaaaaCTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTCCAAAAtt < 1:910583/80‑1 (MQ=255) aaaCTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTCCAAAATTta > 1:910600/1‑80 (MQ=255) aaCTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTCCAAAATTtata > 1:910615/1‑81 (MQ=255) ctcttATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTCCAAAATTTATATATGAt < 1:910584/80‑1 (MQ=255) gATTAATGTTTACAAATTTAGGCATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGa < 2:910585/80‑1 (MQ=255) ttACAAATTTAGGCATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCg > 1:910598/1‑81 (MQ=255) tttAGGCATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCGGTCttat < 2:910586/81‑1 (MQ=255) tAGGCATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCGGTCttatt > 2:910604/1‑80 (MQ=255) | CTCTTTTTTTTATTTCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGTATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCGGTCTTATT > NC_000913/4504947‑4505098 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |