| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 595,846 | A→G | K83E (AAA→GAA) | cusC → | copper/silver export system outer membrane channel |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 595,846 | 0 | A | G | 100.0% | 61.4 / NA | 18 | K83E (AAA→GAA) | cusC | copper/silver export system outer membrane channel |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/12); total (6/12) | |||||||||||
TTGATAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGAAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGGGCAGCGGC > NC_000913/595775‑595923 | ttgATAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCagg < 2:127925/81‑1 (MQ=255) aTAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCaggag < 1:127926/80‑1 (MQ=255) tAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGc < 1:127927/81‑1 (MQ=255) aaGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCaa < 2:127928/81‑1 (MQ=255) cTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGt < 2:127929/81‑1 (MQ=255) tAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGAc > 2:127967/1‑81 (MQ=255) gAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGAt < 2:127930/81‑1 (MQ=255) ggCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGc < 2:127931/81‑1 (MQ=255) gcgcTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGcc < 1:127932/81‑1 (MQ=255) tGGTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGAcc > 1:127970/1‑81 (MQ=255) gTGAATAATCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCg < 1:127933/80‑1 (MQ=255) aatCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCca > 1:127976/1‑81 (MQ=255) tCGGGATTTGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCca > 1:127975/1‑79 (MQ=255) tGCGCATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAAt < 2:127934/80‑1 (MQ=255) gcATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGc > 1:127977/1‑80 (MQ=255) gcATGGCGACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCg < 1:127935/81‑1 (MQ=255) gACGCTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGggcag > 2:127968/1‑81 (MQ=255) cTGGAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGggcagcggc < 2:127936/81‑1 (MQ=255) | TTGATAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGAAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGGGCAGCGGC > NC_000913/595775‑595923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |