| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 749,521 | C→T | E63K (GAG→AAG) | ybgP ← | putative fimbrial chaperone YbgP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 749,521 | 0 | C | T | 100.0% | 49.0 / NA | 15 | E63K (GAG→AAG) | ybgP | putative fimbrial chaperone YbgP |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/6); total (9/6) | |||||||||||
ACCCGCACCTGCGATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGT > NC_000913/749445‑749596 | aCCCGCACCTGCGATGTCGCTTTCGGTTCCTGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCt < 2:158062/81‑1 (MQ=255) cTGCGATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCAtt > 2:158088/1‑81 (MQ=255) cGATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCAtttt < 1:158063/80‑1 (MQ=255) aTGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTa > 2:158083/1‑81 (MQ=255) gCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAg > 2:158085/1‑81 (MQ=255) ttCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGaa > 2:158082/1‑81 (MQ=255) cAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAg < 1:752947/81‑1 (MQ=255) aCGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGAt > 1:158084/1‑80 (MQ=255) gAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGc < 2:158064/80‑1 (MQ=255) cAGAAGAGCATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTc < 2:158065/81‑1 (MQ=255) cATCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACg > 2:158100/1‑79 (MQ=255) tCGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGTTAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAgg > 1:158094/1‑81 (MQ=255) cGCTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGc > 2:158095/1‑81 (MQ=255) cTTTTCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCtg < 1:158066/81‑1 (MQ=255) ttttCTTCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCtgg > 2:158097/1‑81 (MQ=255) ttcttcCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCtggt < 2:158067/80‑1 (MQ=255) | ACCCGCACCTGCGATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGT > NC_000913/749445‑749596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |