| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 771,585 | C→T | S43F (TCC→TTC) | cydA → | cytochrome bd‑I ubiquinol oxidase subunit I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 771,585 | 0 | C | T | 100.0% | 57.4 / NA | 17 | S43F (TCC→TTC) | cydA | cytochrome bd‑I ubiquinol oxidase subunit I |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/11); total (6/11) | |||||||||||
CCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGC > NC_000913/771511‑771660 | ccACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCa < 1:162341/80‑1 (MQ=255) cACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGata > 2:162384/1‑81 (MQ=255) tGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGa > 1:162377/1‑81 (MQ=255) ggTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTc > 1:162370/1‑81 (MQ=255) gTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCt < 1:162343/81‑1 (MQ=255) gTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCt < 2:162342/81‑1 (MQ=255) aTGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTgg > 1:162376/1‑81 (MQ=255) tGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTgg < 2:162344/80‑1 (MQ=255) gCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTgggg > 2:162378/1‑80 (MQ=255) gCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTgggg < 1:162345/80‑1 (MQ=255) ctgGCCATTATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGttt < 1:162346/81‑1 (MQ=255) ttATGGAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCa < 2:162347/81‑1 (MQ=255) gAAACGGTCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTc < 2:162348/81‑1 (MQ=255) tCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTgg < 1:742145/81‑1 (MQ=255) tCTACGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTgg < 2:162349/81‑1 (MQ=255) aCGTCCTCTTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGgtg > 1:162379/1‑81 (MQ=255) ctctTCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGc < 2:162350/80‑1 (MQ=255) | CCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGC > NC_000913/771511‑771660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |