| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 585,822 | (T)7→8 | intergenic (‑189/+325) | ompT ← / ← envY | outer membrane protease VII (outer membrane protein 3b)/DNA‑binding transcriptional activator EnvY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 585,815 | 1 | . | T | 100.0% | 48.5 / NA | 15 | intergenic (‑182/+332) | ompT/envY | outer membrane protease VII (outer membrane protein 3b)/DNA‑binding transcriptional activator EnvY |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (8/7); total (8/7) | |||||||||||
TGAATGATTATCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGG‑TTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTAGAGGCATATAAGCGAAAATA > NC_000913/585738‑585885 | tGAATGATTATCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGG‑ttt > 2:121857/1‑81 (MQ=255) gAATGATTATCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGG‑ttt < 2:121833/80‑1 (MQ=255) aTGATTATCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGG‑tttttt > 1:121858/1‑81 (MQ=255) aTGATTATCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGG‑tttttt > 1:121860/1‑81 (MQ=255) tCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCt < 1:121835/81‑1 (MQ=255) aTGCGATATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTtgt < 1:121836/81‑1 (MQ=255) gcTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTgtggtg > 2:121856/1‑81 (MQ=255) cTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGc > 2:121850/1‑81 (MQ=255) ggTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTAtt > 2:121854/1‑80 (MQ=255) aTCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCa < 1:227307/80‑1 (MQ=255) aTCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCCTTTGTGGTGCTTTTATCTATTTAAGTGCCAt > 2:121869/1‑81 (MQ=255) cTGTTATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGc > 2:121855/1‑81 (MQ=255) tATTGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCtt > 2:121859/1‑80 (MQ=255) ttGTTTCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTa < 1:121837/80‑1 (MQ=255) tttCATATTTCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTagag < 2:121838/80‑1 (MQ=255) tttCGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTAGAGGCATATaa < 2:121839/81‑1 (MQ=255) cGGTTTTACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTAGAGGCATATAAGc > 1:121861/1‑80 (MQ=255) tACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTTCCATTCCTTTAGAGGCATATAAGCGAAAATa > 2:121877/1‑81 (MQ=255) tACTGTGTGGTTTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTAGAGGCATATAAGCGAAAAt < 2:121840/80‑1 (MQ=255) | TGAATGATTATCACAATGCGCTATCTGTTTTTGGTTTAATTATCTGTTATTGTTTCATATTTCGGTTTTACTGTGTGG‑TTTTTTTATGCTTTTGTGGTGCTTTTATCTATTTAAGTGCCATGCCTTTAGAGGCATATAAGCGAAAATA > NC_000913/585738‑585885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |