| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,020,384 | (A)7→8 | intergenic (‑331/+26) | ompA ← / ← sulA | outer membrane porin A/cell division inhibitor SulA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,020,377 | 1 | . | A | 100.0% | 35.6 / NA | 11 | intergenic (‑324/+33) | ompA/sulA | outer membrane porin A/cell division inhibitor SulA |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (5/6); total (5/6) | |||||||||||
AAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGAC‑AAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTG > NC_000913/1020301‑1020451 | aagaGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGAC‑aaaa < 1:204337/81‑1 (MQ=255) agaATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGAC‑aaaaaa > 1:204354/1‑80 (MQ=255) aCCGCTTCAGACAAGCCTCCACAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGAtt < 2:204338/81‑1 (MQ=255) ccGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTa < 2:204339/81‑1 (MQ=255) cAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAAtt > 2:204367/1‑81 (MQ=255) gAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACa < 1:204341/81‑1 (MQ=255) cACGACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGt > 2:204362/1‑80 (MQ=255) aCGACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGa < 1:204342/81‑1 (MQ=255) gACTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAAt > 1:204374/1‑81 (MQ=255) cTGAAAGCATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAAttt < 1:204343/81‑1 (MQ=255) cATTGGCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGccc < 1:204344/81‑1 (MQ=255) ggCTGGGCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGa > 2:204363/1‑80 (MQ=255) ggCGACAAAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTg > 2:204368/1‑81 (MQ=255) | AAGAGAATCGCGGAAACCGCTTCAGACAAGCCTCCGCAAGGAAAATTAGTCACGACTGAAAGCATTGGCTGGGCGAC‑AAAAAAAGTTCCAGGATTAATCCTAAATTTACTTAATGATACAAATTAGAGTGAATTTTTAGCCCGGAAAGTTG > NC_000913/1020301‑1020451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |