| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,304,336 | +T | coding (503/909 nt) | oppC → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,304,332 | 1 | . | T | 100.0% | 67.9 / NA | 20 | I167F (ATT→TTT) | oppC | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppC |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (11/9); total (11/9) | |||||||||||
GCTGGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGA‑TTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGTCTGAAGC > NC_000913/1304253‑1304407 | gctgGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGA‑t > 2:252795/1‑81 (MQ=255) ctgGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGa < 1:252773/79‑1 (MQ=255) ctgGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGA‑tt > 2:252801/1‑81 (MQ=255) gAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGA‑tttt < 1:252774/80‑1 (MQ=255) aTCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGA‑tttttcgt > 2:252806/1‑77 (MQ=255) ccTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTgg > 1:252813/1‑81 (MQ=255) aaCTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCg < 1:252775/79‑1 (MQ=255) cccATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATg < 1:252776/80‑1 (MQ=255) cATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCct > 2:252816/1‑81 (MQ=255) gTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATTGTTTCctggc > 2:252811/1‑81 (MQ=255) cGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCctggctgg < 1:252777/78‑1 (MQ=255) cGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGata > 2:252803/1‑81 (MQ=255) cGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGata > 2:252810/1‑81 (MQ=255) gTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGata < 1:252778/80‑1 (MQ=255) tttGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTc > 2:252809/1‑81 (MQ=255) ttGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTc < 1:252779/80‑1 (MQ=255) gTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATtgt > 1:252805/1‑81 (MQ=255) ttCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGc > 2:252807/1‑80 (MQ=255) tCGGTCAAAACATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCa < 1:252780/80‑1 (MQ=255) aaaaCATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCt > 2:252818/1‑80 (MQ=255) aaaaCATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTg < 2:252781/81‑1 (MQ=255) aaaCATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGa < 2:252782/81‑1 (MQ=255) aCATCCTGCTGATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGt > 2:252812/1‑81 (MQ=255) ctgctgATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGTCTGaa < 1:252783/81‑1 (MQ=255) gctgATTTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGTCTGAAgc > 1:252804/1‑81 (MQ=255) | GCTGGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGA‑TTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGTCTGAAGC > NC_000913/1304253‑1304407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |