| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,527,350 | G→A | intergenic (+198/‑540) | yncH → / → rhsE | DUF5445 domain‑containing protein YncH/RhsE protein in rhs element |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,527,350 | 0 | G | A | 100.0% | 12.7 / NA | 5 | intergenic (+198/‑540) | yncH/rhsE | DUF5445 domain‑containing protein YncH/RhsE protein in rhs element |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (3/2); total (3/2) | |||||||||||
TATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTACCACTGAAGCAAGATCA > NC_000913/1527279‑1527412 | tATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGAGCAGGGGa > 1:289210/1‑80 (MQ=255) aaTCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGAGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTa > 1:289213/1‑81 (MQ=255) aTCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGAGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGt < 1:289195/79‑1 (MQ=255) gTGAGAGCTACACATTATTGGAGGAGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTACCACTGAAGCa < 2:289196/81‑1 (MQ=255) gCTACACATTATTGGAGGAGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTACCACTGATGCAAGatca > 1:289215/1‑81 (MQ=255) | TATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATTATTGGAGGGGCAGGGGAAAACACCATTTTGGGAACAATGCATCAGGTACTCTTACCACTGAAGCAAGATCA > NC_000913/1527279‑1527412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |