| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,185,882 | A→T | intergenic (‑86/‑35) | rcnR ← / → rcnA | DNA‑binding transcriptional repressor RcnR/Ni(2(+))/Co(2(+)) exporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,185,882 | 0 | A | T | 100.0% | 66.4 / NA | 19 | intergenic (‑86/‑35) | rcnR/rcnA | DNA‑binding transcriptional repressor RcnR/Ni(2(+))/Co(2(+)) exporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (8/11); total (8/11) | |||||||||||
GTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCT > NC_000913/2185808‑2185956 | gTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGAt < 2:397521/81‑1 (MQ=255)gTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGAt < 2:397522/81‑1 (MQ=255) aaGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGa < 2:397523/81‑1 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGaa > 1:397549/1‑81 (MQ=255) gAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAAt < 1:397524/81‑1 (MQ=255) tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATa > 1:397545/1‑81 (MQ=255) aaaTCATAACACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACt > 2:397541/1‑79 (MQ=255) aaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAg < 2:397525/81‑1 (MQ=255) aCTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATtattat < 1:397526/81‑1 (MQ=255) aCTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATtattat > 1:397550/1‑81 (MQ=255) aaTCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGa < 1:397527/80‑1 (MQ=255) ggggggTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTa > 2:397548/1‑81 (MQ=255) ggggTAGTATCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa < 1:800013/81‑1 (MQ=255) tCAGGTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttct < 1:397528/80‑1 (MQ=255) ggTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAg > 2:397544/1‑81 (MQ=255) gTACTGGGGGGGAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAg > 2:397547/1‑80 (MQ=255) ggAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGc > 1:397552/1‑81 (MQ=255) ggAGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGc < 2:397529/81‑1 (MQ=255) aGTAGATTCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCt < 1:397530/81‑1 (MQ=255) | GTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCT > NC_000913/2185808‑2185956 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |