| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,313,055 | A→G | intergenic (‑306/‑29) | ompC ← / → micF | outer membrane porin C/small regulatory RNA MicF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,313,055 | 0 | A | G | 100.0% | 39.5 / NA | 12 | intergenic (‑306/‑29) | ompC/micF | outer membrane porin C/small regulatory RNA MicF |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/6); total (6/6) | |||||||||||
CAATAATAATTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAAACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAAT > NC_000913/2312986‑2313128 | cAATAATAATTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCg > 2:420916/1‑81 (MQ=255) taataatTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCaa < 1:420892/81‑1 (MQ=255) ataatTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAAc < 2:420893/80‑1 (MQ=255) cAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAAt > 1:420915/1‑80 (MQ=255) cAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAAt < 2:420894/80‑1 (MQ=255) cAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAAt > 2:420913/1‑80 (MQ=255) aaaTCAATAACTTATTCTTAAGTATTTGACAGCACAGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGc < 1:420895/81‑1 (MQ=255) ttCTTAAGTATTTGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAAc < 1:420896/80‑1 (MQ=255) ttGACAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTAc > 2:420912/1‑81 (MQ=255) cAGCACTGAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGtc < 2:420897/81‑1 (MQ=255) gAATGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTcattcatt > 1:420918/1‑81 (MQ=255) aaTGTCAAAACAAGACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACGGCCATTCAttt > 1:420917/1‑81 (MQ=255) aaaacaagacCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAAt < 1:420898/81‑1 (MQ=255) | CAATAATAATTCAAGGTTAAAATCAATAACTTATTCTTAAGTATTTGACAGCACTGAATGTCAAAACAAAACCTTCACTCGCAACTAGAATAACTCCCGCTATCATCATTAACTTTATTTATTACCGTCATTCATTTCTGAAT > NC_000913/2312986‑2313128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |