| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,365,594 | C→T | L9L (TTG→TTA) | ais ← | putative lipopolysaccharide core heptose(II)‑phosphate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,365,594 | 0 | C | T | 100.0% | 74.2 / NA | 21 | L9L (TTG→TTA) | ais | putative lipopolysaccharide core heptose(II)‑phosphate phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (10/11); total (10/11) | |||||||||||
CTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATT > NC_000913/2365517‑2365668 | cTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAAc > 2:430724/1‑81 (MQ=255) cggcATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCgg > 2:430708/1‑80 (MQ=255) cggcATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGc < 1:430686/81‑1 (MQ=255) cATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCaa > 1:430692/1‑80 (MQ=255) tGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCaaaaa < 2:430687/81‑1 (MQ=255) ccGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTa > 2:430721/1‑80 (MQ=255) cAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTc < 2:430688/81‑1 (MQ=255) aTTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCa < 1:430689/81‑1 (MQ=255) gCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCAcc > 1:430722/1‑80 (MQ=255) agcgCCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGAc < 1:430690/81‑1 (MQ=255) gcCAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAg > 1:430728/1‑81 (MQ=255) ccAGTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAgc < 1:430691/81‑1 (MQ=255) gTAAAATGATGATATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAgcgc > 2:430723/1‑80 (MQ=255) tgatgaTATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGa < 2:430692/81‑1 (MQ=255) atgatATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGAc < 2:430693/80‑1 (MQ=255) atgatATATTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACa < 2:430694/81‑1 (MQ=255) atatatTTTTTTGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAAtt < 2:430695/81‑1 (MQ=255) ttttGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGa > 1:430727/1‑80 (MQ=255) ttttGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGa < 1:430696/80‑1 (MQ=255) tGACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAAtt > 2:430731/1‑81 (MQ=255) gACTTTAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAAtt > 2:430729/1‑80 (MQ=255) | CTACTCCAGGCGGCATGAGTACCCAGTCCGGCAATTGCAGCGAGCGCCAGTAAAATGATGATATATTTTTTTGACTTCAACGAAGAGCGGCAAAAAGCTAACACGTAAACTCCACCTATAGACAAGCGCAACCAGACAATTACCGTGAAATT > NC_000913/2365517‑2365668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |