| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 294,118 | G→A | L228F (CTT→TTT) | yagM ← | CP4‑6 prophage; protein YagM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 294,118 | 0 | G | A | 100.0% | 42.0 / NA | 13 | L228F (CTT→TTT) | yagM | CP4‑6 prophage; protein YagM |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/8); total (5/8) | |||||||||||
ACCACCATTTCATTGACATGGTAAATATCAATCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAGAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCTGCCCGGCAT > NC_000913/294042‑294180 | accaccATTTCATTGACATGGTAAATATCAATCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAAAACt < 1:64458/81‑1 (MQ=255) caccaTTTCATTGACATGGTAAATATCAATCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAAAACtt > 1:64475/1‑80 (MQ=255) ggTAAATATCAATACAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAACACTTCATTTATCCCGAATATaa > 1:64495/1‑81 (MQ=255) atatCAATCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAAt < 1:64460/81‑1 (MQ=255) atatCAATCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAAt < 2:64459/81‑1 (MQ=255) aTCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGAt < 1:64461/81‑1 (MQ=255) aacaacCGGATAAGGCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGAc > 1:64484/1‑79 (MQ=255) aaGGCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCt > 2:64482/1‑81 (MQ=255) aGGCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCt < 1:64462/80‑1 (MQ=255) ggCATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCTGc > 2:64478/1‑81 (MQ=255) cATAACAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCTGccc < 2:64463/81‑1 (MQ=255) aCAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCTGCCCGGCa < 1:64464/81‑1 (MQ=255) cAATCCCCTTTCTTCTAAAAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCTGCCCGGCAt < 1:64465/81‑1 (MQ=255) | ACCACCATTTCATTGACATGGTAAATATCAATCCAACAAACAACCGGATAAGGCATAACAATCCCCTTTCTTCTAAGAACTTCATTTATCCCGAATATAATCAATTGGGATGTTGACAAGAGTAGAGCCTGCCCGGCAT > NC_000913/294042‑294180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |