| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,773,721 | T→C | F135S (TTT→TCT) | yfjW → | CP4‑57 prophage; uncharacterized protein YfjW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,773,721 | 0 | T | C | 100.0% | 47.4 / NA | 14 | F135S (TTT→TCT) | yfjW | CP4‑57 prophage; uncharacterized protein YfjW |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/8); total (6/8) | |||||||||||
AGATGTGGCGTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTTTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCTTAATAAGATAAA > NC_000913/2773647‑2773790 | aGATGTGGCGTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGc < 1:510352/81‑1 (MQ=255) aTGTGGCGTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGa > 1:510378/1‑81 (MQ=255) gTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTAtt > 1:510368/1‑81 (MQ=255) gTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTAtt > 2:510372/1‑81 (MQ=255) tAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGt > 1:510369/1‑81 (MQ=255) gCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGttt < 1:510353/81‑1 (MQ=255) ttAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTAtg > 2:510375/1‑81 (MQ=255) atatAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTAt < 2:510354/81‑1 (MQ=255) tGAATAATATTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTccc > 2:510376/1‑81 (MQ=255) atatTTTGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCtt < 2:510355/80‑1 (MQ=255) ttttGTTAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTc < 2:510356/80‑1 (MQ=255) ttAAATATACTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCtt < 1:510357/81‑1 (MQ=255) tataCTATATAATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCTtaataa < 1:510358/81‑1 (MQ=255) tataATCTTTCTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCTTAATAAGATaaa < 2:510359/80‑1 (MQ=255) | AGATGTGGCGTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTTTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCTTAATAAGATAAA > NC_000913/2773647‑2773790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |