| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,633,702 | C→T | pseudogene (757/1607 nt) | yhiL ← | putative uncharacterized protein YhiL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,633,702 | 0 | C | T | 100.0% | 39.0 / NA | 12 | pseudogene (757/1607 nt) | yhiL | putative uncharacterized protein YhiL |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/8); total (4/8) | |||||||||||
AGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTTTATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTCGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGCCCTGAAACGAGCAAT > NC_000913/3633624‑3633772 | aGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTTTATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTTgt < 2:701194/81‑1 (MQ=255) gTATTTAATAAATCGTAGAGCACTTTATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTc < 1:701195/80‑1 (MQ=255) aTTTAATAAATCGTAGAGCTCTTTATTATTTTTATGTTTGTATGCAGATAAAGCCATCTCTTTGTGTTTTAATAATTcaca > 2:701211/1‑81 (MQ=255) aTCGTAGAGCACTTTATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACt < 2:701196/81‑1 (MQ=255) cTTTATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCtttt < 1:701197/81‑1 (MQ=255) tttATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTc > 2:701217/1‑81 (MQ=255) ttattTTTATGTTTGTATGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTg < 2:701198/81‑1 (MQ=255) ttGTATGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGc > 2:701226/1‑81 (MQ=255) tGCAGATGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGCCCTg < 2:701199/80‑1 (MQ=255) aTGAAGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGCCCTGAAAc > 1:701219/1‑79 (MQ=255) aaGCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGCCCTGAAACGAGc < 2:701200/80‑1 (MQ=255) gCCATCTCTTTGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGCCCTGAAACGAGCAAt < 1:701201/81‑1 (MQ=255) | AGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTTTATTATTTTTATGTTTGTATGCAGATGAAGCCATCTCTTCGTGTTTTAATAATTCACATAATAAACTCCAACCCTTTTCCCTGATGCCTATATGCCCTGAAACGAGCAAT > NC_000913/3633624‑3633772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |