| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 522,992 | C→T | intergenic (+162/‑269) | ybbP → / → rhsD | putative ABC transporter membrane subunit YbbP/protein RhsD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 522,992 | 0 | C | T | 100.0% | 40.3 / NA | 12 | intergenic (+162/‑269) | ybbP/rhsD | putative ABC transporter membrane subunit YbbP/protein RhsD |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/8); total (4/8) | |||||||||||
ATTGGTGATTTCCTATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGA > NC_000913/522916‑523066 | aTTGGTGATTTCCTATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTATaaaa < 1:110707/81‑1 (MQ=255) tGGTGATTTCCTATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTATaaaaa > 1:110728/1‑80 (MQ=255) aTTTCCTATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTATAAAAATAACTc < 2:110708/81‑1 (MQ=255) ttCCTATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTATAAAAATAACt > 1:110726/1‑78 (MQ=255) aaTCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATg < 1:110709/80‑1 (MQ=255) aaTCGGTGGAGTTTATTGATTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTg < 2:110710/79‑1 (MQ=255) aaTCGGTGGAGTTTATTGATTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGa < 1:110711/80‑1 (MQ=255) gAGTTTATTGATTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGatat < 1:110712/80‑1 (MQ=255) tATTGATTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATcc < 2:110713/80‑1 (MQ=255) aTTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAg < 1:110714/81‑1 (MQ=255) aTTTTAAATATAGCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAg > 1:110734/1‑81 (MQ=255) gCCCTATAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTtga > 1:110729/1‑81 (MQ=255) | ATTGGTGATTTCCTATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGA > NC_000913/522916‑523066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |