| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 937,762 | G→A | G131S (GGC→AGC) | lolA → | outer membrane lipoprotein carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 937,762 | 0 | G | A | 100.0% | 62.2 / NA | 18 | G131S (GGC→AGC) | lolA | outer membrane lipoprotein carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (12/6); total (12/6) | |||||||||||
GCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGG > NC_000913/937684‑937838 | gCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGc > 1:189371/1‑81 (MQ=255)gCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGc > 1:189372/1‑81 (MQ=255) ccACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGc < 2:189351/80‑1 (MQ=255) aCCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGAt > 2:189370/1‑81 (MQ=255) tAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACtt < 1:189352/81‑1 (MQ=255) cGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTcc > 1:189375/1‑81 (MQ=255) aTGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGcc > 2:189379/1‑80 (MQ=255) aTGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGcc < 2:189353/80‑1 (MQ=255) cTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGaaa < 1:189354/81‑1 (MQ=255) aTTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGc < 2:189355/80‑1 (MQ=255) gCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAg > 1:189369/1‑80 (MQ=255) aaCCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATgg > 1:189380/1‑80 (MQ=255) aaCCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATgg > 2:189377/1‑80 (MQ=255) cAGCGACTGGCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGaa < 2:189356/81‑1 (MQ=255) ggCAGCAGTACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGTCAATCTGAAGCAGTTCa > 2:189374/1‑81 (MQ=255) tACAATATCAAACAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAAc > 1:189376/1‑81 (MQ=255) cAGAATAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGAt > 1:189384/1‑81 (MQ=255) aaTAGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATgg > 1:189381/1‑80 (MQ=255) | GCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGG > NC_000913/937684‑937838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |