| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,113,489 | G→A | intergenic (+83/‑90) | opgH → / → yceK | osmoregulated periplasmic glucans (OPGs) biosynthesis protein H/DUF1375 domain‑containing lipoprotein YceK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,113,489 | 0 | G | A | 100.0% | 50.7 / NA | 15 | intergenic (+83/‑90) | opgH/yceK | osmoregulated periplasmic glucans (OPGs) biosynthesis protein H/DUF1375 domain‑containing lipoprotein YceK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/10); total (5/10) | |||||||||||
GTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTT > NC_000913/1113414‑1113561 | gTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATaa < 2:220701/80‑1 (MQ=255) cTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGtt < 2:517342/81‑1 (MQ=255) aTGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCAc < 1:220702/81‑1 (MQ=255) aTGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCAc < 2:220703/81‑1 (MQ=255) cgcTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCAcgcc < 1:220704/81‑1 (MQ=255) cGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCAt < 1:220705/80‑1 (MQ=255) cTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCg < 2:220706/81‑1 (MQ=255) aTCAGGCCTACATCGTTCCTCCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCgg < 1:220707/79‑1 (MQ=255) gCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCGGCaaaaa > 2:220728/1‑80 (MQ=255) tACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCGGCAAAaacaac > 2:220736/1‑81 (MQ=255) gTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCa < 2:220708/81‑1 (MQ=255) gCAATTTATTGATTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATaaa > 1:220732/1‑80 (MQ=255) aTTTTGCAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGt > 1:220740/1‑80 (MQ=255) cAAGACTTTGTGGGTCGAATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGcc < 2:220709/80‑1 (MQ=255) gtgGGTCGAATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAtttttt > 1:220729/1‑81 (MQ=255) | GTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTT > NC_000913/1113414‑1113561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |