Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,712,700	Δ1 bp	intergenic (+542/‑69)	nth → / → dtpA	endonuclease III/dipeptide/tripeptide:H(+) symporter DtpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,712,700	0	G	.	100.0%	40.9 / NA	10	intergenic (+542/‑69)	nth/dtpA	endonuclease III/dipeptide/tripeptide:H(+) symporter DtpA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (4/6);  total (4/6)

ACAAAGGACTTGTCTGAAAGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGCGCGTATGTTTTTTATACATAACGCGAGAAAGCACCCCCGTTAATATGGGATGTAAAA  >  NC_000913/1712629‑1712756                                                                        |                                                         aCAAAGGACTTGTCTGAAAGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGtttt                                                >  1:295582/1‑81 (MQ=255) aCAAAGGACTTGTCTGAAAGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGttt                                                 <  2:295569/80‑1 (MQ=255)         cTTGTCTGAAAGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACAt                                        <  2:295570/81‑1 (MQ=255)                gAAAGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAAcgc                                   >  1:295585/1‑79 (MQ=255)                 aaaGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAAcgcg                                  <  1:295571/79‑1 (MQ=255)                   aGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAACGCGAGaa                              <  1:295572/81‑1 (MQ=255)                                         cTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAACGCGAGAAAGCACCCCCGTTAATATGGGAt        >  1:295584/1‑81 (MQ=255)                                         cTGCCGTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAACGCGAGAAAGCACCCCCGTTAATATGGGAt        >  1:295586/1‑81 (MQ=255)                                              gTTTCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAACGCGAGAAAGCACCCCCGTTAATATGGGATGTaaa   <  1:295573/81‑1 (MQ=255)                                               tttCCCCTCCCACTATAACAATTGC‑CGTATGTTTTTTATACATAACGCGAGAAAGCACCCCCGTTAATATGGGATGTaaaa  <  1:295574/81‑1 (MQ=255)                                                                        |                                                         ACAAAGGACTTGTCTGAAAGTGCAAGATAGTGAACATTACCTGCCGTTTCCCCTCCCACTATAACAATTGCGCGTATGTTTTTTATACATAACGCGAGAAAGCACCCCCGTTAATATGGGATGTAAAA  >  NC_000913/1712629‑1712756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑